STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOR94384.1Hemin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (532 aa)    
Predicted Functional Partners:
OOR94383.1
Hemolysin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.961
rpoD
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
       0.566
OOR94293.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.502
OOR93226.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.491
OOR94292.1
Phage minor tail protein L; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.484
OOR94294.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.483
OOR93225.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.475
OOR94295.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.467
OOR94291.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.463
OOR93227.1
Phage minor tail protein L; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.460
Your Current Organism:
Haemophilus paraphrohaemolyticus
NCBI taxonomy Id: 736
Other names: ATCC 29237, CCUG 3718, CIP 102512, DSM 21451, H. paraphrohaemolyticus, NCTC 10670
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