OOR93979.1 protein (Haemophilus paraphrohaemolyticus)

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[Homology]

Score

OOR93979.1

ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (645 aa)

Predicted Functional Partners:

rplU

0.732

rplT

0.730

rpsC

0.727

rplD

0.726

rpsO

0.726

rpmD

0.725

rpmH

0.723

rpsS

0.720

rplC

0.720

rpsJ

0.720

Your Current Organism:

Haemophilus paraphrohaemolyticus

NCBI taxonomy Id: 736
Other names: ATCC 29237, CCUG 3718, CIP 102512, DSM 21451, H. paraphrohaemolyticus, NCTC 10670

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OOR93979.1	rplC	B0184_08950	B0184_04060	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.720
OOR93979.1	rplD	B0184_08950	B0184_04055	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	0.726
OOR93979.1	rplT	B0184_08950	B0184_06075	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.730
OOR93979.1	rplU	B0184_08950	B0184_08625	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.732
OOR93979.1	rpmD	B0184_08950	B0184_03500	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L30; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.725
OOR93979.1	rpmH	B0184_08950	B0184_08595	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L34; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL34 family.	0.723
OOR93979.1	rpsC	B0184_08950	B0184_04030	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.727
OOR93979.1	rpsJ	B0184_08950	B0184_04065	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.720
OOR93979.1	rpsO	B0184_08950	B0184_07550	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.726
OOR93979.1	rpsS	B0184_08950	B0184_04040	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.720
rplC	OOR93979.1	B0184_04060	B0184_08950	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.720
rplC	rplD	B0184_04060	B0184_04055	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	0.999
rplC	rplT	B0184_04060	B0184_06075	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.994
rplC	rplU	B0184_04060	B0184_08625	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.993
rplC	rpmD	B0184_04060	B0184_03500	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	50S ribosomal protein L30; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
rplC	rpmH	B0184_04060	B0184_08595	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	50S ribosomal protein L34; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL34 family.	0.959
rplC	rpsC	B0184_04060	B0184_04030	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.999
rplC	rpsJ	B0184_04060	B0184_04065	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.999
rplC	rpsO	B0184_04060	B0184_07550	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.986
rplC	rpsS	B0184_04060	B0184_04040	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.999

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