Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OOR93525.1 | OOR93526.1 | B0184_09500 | B0184_09505 | DUF805 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.639 |
| OOR93525.1 | OOR93527.1 | B0184_09500 | B0184_09510 | DUF805 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Toxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.639 |
| OOR93525.1 | pth | B0184_09500 | B0184_09495 | DUF805 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | 0.501 |
| OOR93525.1 | srmB | B0184_09500 | B0184_09515 | DUF805 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent RNA helicase SrmB; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit at low temperature. Exhibits RNA-stimulated ATP hydrolysis and RNA unwinding activity; Belongs to the DEAD box helicase family. SrmB subfamily. | 0.441 |
| OOR93526.1 | OOR93525.1 | B0184_09505 | B0184_09500 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | DUF805 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.639 |
| OOR93526.1 | OOR93527.1 | B0184_09505 | B0184_09510 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Toxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.987 |
| OOR93526.1 | pth | B0184_09505 | B0184_09495 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | 0.424 |
| OOR93526.1 | srmB | B0184_09505 | B0184_09515 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent RNA helicase SrmB; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit at low temperature. Exhibits RNA-stimulated ATP hydrolysis and RNA unwinding activity; Belongs to the DEAD box helicase family. SrmB subfamily. | 0.521 |
| OOR93527.1 | OOR93525.1 | B0184_09510 | B0184_09500 | Toxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | DUF805 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.639 |
| OOR93527.1 | OOR93526.1 | B0184_09510 | B0184_09505 | Toxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.987 |
| OOR93527.1 | pth | B0184_09510 | B0184_09495 | Toxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | 0.424 |
| OOR93527.1 | srmB | B0184_09510 | B0184_09515 | Toxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent RNA helicase SrmB; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit at low temperature. Exhibits RNA-stimulated ATP hydrolysis and RNA unwinding activity; Belongs to the DEAD box helicase family. SrmB subfamily. | 0.519 |
| pth | OOR93525.1 | B0184_09495 | B0184_09500 | Hypothetical protein; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | DUF805 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.501 |
| pth | OOR93526.1 | B0184_09495 | B0184_09505 | Hypothetical protein; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.424 |
| pth | OOR93527.1 | B0184_09495 | B0184_09510 | Hypothetical protein; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | Toxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.424 |
| srmB | OOR93525.1 | B0184_09515 | B0184_09500 | ATP-dependent RNA helicase SrmB; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit at low temperature. Exhibits RNA-stimulated ATP hydrolysis and RNA unwinding activity; Belongs to the DEAD box helicase family. SrmB subfamily. | DUF805 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.441 |
| srmB | OOR93526.1 | B0184_09515 | B0184_09505 | ATP-dependent RNA helicase SrmB; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit at low temperature. Exhibits RNA-stimulated ATP hydrolysis and RNA unwinding activity; Belongs to the DEAD box helicase family. SrmB subfamily. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.521 |
| srmB | OOR93527.1 | B0184_09515 | B0184_09510 | ATP-dependent RNA helicase SrmB; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit at low temperature. Exhibits RNA-stimulated ATP hydrolysis and RNA unwinding activity; Belongs to the DEAD box helicase family. SrmB subfamily. | Toxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.519 |