Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OOR93578.1Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (390 aa)    
Predicted Functional Partners:
OOR93577.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.918
OOR93581.1
Host-nuclease inhibitor protein Gam; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.897
OOR93586.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.872
OOR93585.1
GemA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.856
OOR93574.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.849
OOR93561.1
Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.792
OOR93552.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.790
OOR93560.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.790
OOR93562.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.790
OOR93559.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.788
Your Current Organism:
Haemophilus paraphrohaemolyticus
NCBI taxonomy Id: 736
Other names: ATCC 29237, CCUG 3718, CIP 102512, DSM 21451, H. paraphrohaemolyticus, NCTC 10670
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