STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOR93241.1DNA packaging protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (707 aa)    
Predicted Functional Partners:
OOR93239.1
Phage portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.956
OOR93238.1
Peptidase S14; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.945
OOR93237.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.910
OOR93242.1
Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.803
OOR93240.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.775
OOR93539.1
Phage baseplate protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.717
OOR93550.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.689
OOR96377.1
DUF805 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.680
OOR93226.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.668
OOR93227.1
Phage minor tail protein L; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.665
Your Current Organism:
Haemophilus paraphrohaemolyticus
NCBI taxonomy Id: 736
Other names: ATCC 29237, CCUG 3718, CIP 102512, DSM 21451, H. paraphrohaemolyticus, NCTC 10670
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