STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1I8MVC0Ubiquitin_4 domain-containing protein. (335 aa)    
Predicted Functional Partners:
A0A1I8M4W9
RRM domain-containing protein.
    
 0.815
A0A1I8MG94
Uncharacterized protein.
     
 0.787
A0A1I8NJ09
Uncharacterized protein.
     
 0.699
A0A1I8N319
Uncharacterized protein.
   
  
 0.663
A0A1I8MQL1
Cwf21 domain-containing protein.
     
 0.597
A0A1I8M2N4
Sm domain-containing protein; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.583
A0A1I8MMX1
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
     
 0.557
A0A1I8MEL0
Small nuclear ribonucleoprotein Sm D3.
   
 
 0.546
T1PGT4_MUSDO
Ribosomal protein L7Ae/L30e/S12e/Gadd47.
   
    0.544
A0A1I8MRN8
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
   
  
 0.514
Your Current Organism:
Musca domestica
NCBI taxonomy Id: 7370
Other names: house fly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.