Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A1I8MA08 | A0A1I8MEY2 | A0A1I8MA08 | A0A1I8MEY2 | General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | Uncharacterized protein. | 0.999 |
A0A1I8MA08 | A0A1I8MGX1 | A0A1I8MA08 | A0A1I8MGX1 | General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | HTH TFE/IIEalpha-type domain-containing protein. | 0.996 |
A0A1I8MA08 | A0A1I8MTB2 | A0A1I8MA08 | A0A1I8MTB2 | General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | Uncharacterized protein. | 0.999 |
A0A1I8MA08 | A0A1I8MUW5 | A0A1I8MA08 | A0A1I8MUW5 | General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. | 0.997 |
A0A1I8MA08 | A0A1I8MZY5 | A0A1I8MA08 | A0A1I8MZY5 | General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | CYCLIN domain-containing protein; Belongs to the cyclin family. | 0.984 |
A0A1I8MA08 | A0A1I8N5G9 | A0A1I8MA08 | A0A1I8N5G9 | General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | Uncharacterized protein. | 0.999 |
A0A1I8MA08 | A0A1I8N6I9 | A0A1I8MA08 | A0A1I8N6I9 | General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | General transcription factor IIH subunit. | 0.999 |
A0A1I8MA08 | A0A1I8N808 | A0A1I8MA08 | A0A1I8N808 | General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | Helicase ATP-binding domain-containing protein. | 0.998 |
A0A1I8MA08 | T1PH62_MUSDO | A0A1I8MA08 | T1PH62 | General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. | 0.992 |
A0A1I8MA08 | T1PJJ4_MUSDO | A0A1I8MA08 | T1PJJ4 | General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. | 0.970 |
A0A1I8MEY2 | A0A1I8MA08 | A0A1I8MEY2 | A0A1I8MA08 | Uncharacterized protein. | General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | 0.999 |
A0A1I8MEY2 | A0A1I8MGX1 | A0A1I8MEY2 | A0A1I8MGX1 | Uncharacterized protein. | HTH TFE/IIEalpha-type domain-containing protein. | 0.996 |
A0A1I8MEY2 | A0A1I8MTB2 | A0A1I8MEY2 | A0A1I8MTB2 | Uncharacterized protein. | Uncharacterized protein. | 0.999 |
A0A1I8MEY2 | A0A1I8MUW5 | A0A1I8MEY2 | A0A1I8MUW5 | Uncharacterized protein. | CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. | 0.998 |
A0A1I8MEY2 | A0A1I8MZY5 | A0A1I8MEY2 | A0A1I8MZY5 | Uncharacterized protein. | CYCLIN domain-containing protein; Belongs to the cyclin family. | 0.990 |
A0A1I8MEY2 | A0A1I8N5G9 | A0A1I8MEY2 | A0A1I8N5G9 | Uncharacterized protein. | Uncharacterized protein. | 0.999 |
A0A1I8MEY2 | A0A1I8N6I9 | A0A1I8MEY2 | A0A1I8N6I9 | Uncharacterized protein. | General transcription factor IIH subunit. | 0.998 |
A0A1I8MEY2 | A0A1I8N808 | A0A1I8MEY2 | A0A1I8N808 | Uncharacterized protein. | Helicase ATP-binding domain-containing protein. | 0.999 |
A0A1I8MEY2 | T1PH62_MUSDO | A0A1I8MEY2 | T1PH62 | Uncharacterized protein. | Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. | 0.996 |
A0A1I8MEY2 | T1PJJ4_MUSDO | A0A1I8MEY2 | T1PJJ4 | Uncharacterized protein. | General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. | 0.979 |
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