STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FF38_00663FRG1-like protein. (264 aa)    
Predicted Functional Partners:
FF38_12121
MPN domain-containing protein.
    
   0.832
FF38_09684
Uncharacterized protein.
    
   0.790
FF38_00561
WD_REPEATS_REGION domain-containing protein.
    
   0.776
FF38_02809
Uncharacterized protein.
    
   0.660
FF38_02820
Small nuclear ribonucleoprotein F; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 
 0.652
FF38_07950
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
    
 
 0.646
FF38_03493
Tr-type G domain-containing protein.
    
   0.642
FF38_02186
Uncharacterized protein.
   
   0.603
FF38_05725
Cir_N domain-containing protein.
   
 
 0.587
FF38_12813
Uncharacterized protein.
   
 
 0.585
Your Current Organism:
Lucilia cuprina
NCBI taxonomy Id: 7375
Other names: Australian sheep blowfly, L. cuprina, greenbottle fly
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