FF38_10412 protein (Lucilia cuprina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

FF38_10412

Uncharacterized protein. (137 aa)

Predicted Functional Partners:

FF38_14217

0.998

FF38_11519

0.989

FF38_10854

0.986

FF38_02332

0.986

FF38_06047

0.984

FF38_07818

0.983

FF38_03940

0.982

FF38_12943

0.980

FF38_13289

0.980

FF38_03707

0.977

Your Current Organism:

Lucilia cuprina

NCBI taxonomy Id: 7375
Other names: Australian sheep blowfly, L. cuprina, greenbottle fly

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FF38_02332	FF38_03707	A0A0L0C403	A0A0L0BXU9	Uncharacterized protein.	40S ribosomal protein S12, mitochondrial; Belongs to the universal ribosomal protein uS12 family.	0.999
FF38_02332	FF38_03940	A0A0L0C403	A0A0L0CDN1	Uncharacterized protein.	Uncharacterized protein.	0.999
FF38_02332	FF38_06047	A0A0L0C403	A0A0L0CM16	Uncharacterized protein.	Putative 28S ribosomal protein S16, mitochondrial.	0.999
FF38_02332	FF38_07818	A0A0L0C403	A0A0L0BYN8	Uncharacterized protein.	28S ribosomal protein S15, mitochondrial; Belongs to the universal ribosomal protein uS15 family.	0.998
FF38_02332	FF38_10412	A0A0L0C403	A0A0L0BQE0	Uncharacterized protein.	Uncharacterized protein.	0.986
FF38_02332	FF38_10854	A0A0L0C403	A0A0L0C3Y1	Uncharacterized protein.	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family.	0.995
FF38_02332	FF38_11519	A0A0L0C403	A0A0L0CAW1	Uncharacterized protein.	CHCH domain-containing protein.	0.984
FF38_02332	FF38_12943	A0A0L0C403	A0A0L0BZV3	Uncharacterized protein.	28S ribosomal protein S10, mitochondrial.	0.999
FF38_02332	FF38_13289	A0A0L0C403	A0A0L0C4W9	Uncharacterized protein.	Uncharacterized protein.	0.961
FF38_02332	FF38_14217	A0A0L0C403	A0A0L0BS38	Uncharacterized protein.	Uncharacterized protein.	0.981
FF38_03707	FF38_02332	A0A0L0BXU9	A0A0L0C403	40S ribosomal protein S12, mitochondrial; Belongs to the universal ribosomal protein uS12 family.	Uncharacterized protein.	0.999
FF38_03707	FF38_03940	A0A0L0BXU9	A0A0L0CDN1	40S ribosomal protein S12, mitochondrial; Belongs to the universal ribosomal protein uS12 family.	Uncharacterized protein.	0.999
FF38_03707	FF38_06047	A0A0L0BXU9	A0A0L0CM16	40S ribosomal protein S12, mitochondrial; Belongs to the universal ribosomal protein uS12 family.	Putative 28S ribosomal protein S16, mitochondrial.	0.999
FF38_03707	FF38_07818	A0A0L0BXU9	A0A0L0BYN8	40S ribosomal protein S12, mitochondrial; Belongs to the universal ribosomal protein uS12 family.	28S ribosomal protein S15, mitochondrial; Belongs to the universal ribosomal protein uS15 family.	0.999
FF38_03707	FF38_10412	A0A0L0BXU9	A0A0L0BQE0	40S ribosomal protein S12, mitochondrial; Belongs to the universal ribosomal protein uS12 family.	Uncharacterized protein.	0.977
FF38_03707	FF38_10854	A0A0L0BXU9	A0A0L0C3Y1	40S ribosomal protein S12, mitochondrial; Belongs to the universal ribosomal protein uS12 family.	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family.	0.993
FF38_03707	FF38_11519	A0A0L0BXU9	A0A0L0CAW1	40S ribosomal protein S12, mitochondrial; Belongs to the universal ribosomal protein uS12 family.	CHCH domain-containing protein.	0.975
FF38_03707	FF38_12943	A0A0L0BXU9	A0A0L0BZV3	40S ribosomal protein S12, mitochondrial; Belongs to the universal ribosomal protein uS12 family.	28S ribosomal protein S10, mitochondrial.	0.998
FF38_03707	FF38_13289	A0A0L0BXU9	A0A0L0C4W9	40S ribosomal protein S12, mitochondrial; Belongs to the universal ribosomal protein uS12 family.	Uncharacterized protein.	0.954
FF38_03707	FF38_14217	A0A0L0BXU9	A0A0L0BS38	40S ribosomal protein S12, mitochondrial; Belongs to the universal ribosomal protein uS12 family.	Uncharacterized protein.	0.968