STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FF38_08882Uncharacterized protein. (249 aa)    
Predicted Functional Partners:
FF38_05292
Uncharacterized protein.
   
 
 0.741
FF38_05284
Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.
   
 0.691
FF38_01572
Uncharacterized protein.
   
    0.673
FF38_07100
AAA_23 domain-containing protein.
    
 0.657
FF38_08879
Uncharacterized protein.
   
  
0.514
FF38_08877
Uncharacterized protein.
   
  
0.514
FF38_10971
SMC_N domain-containing protein.
    
 0.469
FF38_13048
AAA_23 domain-containing protein.
    
 0.469
FF38_05201
AAA_23 domain-containing protein.
    
 0.469
FF38_00419
Structural maintenance of chromosomes protein.
   
 0.414
Your Current Organism:
Lucilia cuprina
NCBI taxonomy Id: 7375
Other names: Australian sheep blowfly, L. cuprina, greenbottle fly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.