STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FF38_00838Uncharacterized protein. (577 aa)    
Predicted Functional Partners:
FF38_07878
Serine-arginine protein 55.
   
 0.768
FF38_09148
Uncharacterized protein.
   
 0.740
FF38_05219
Uncharacterized protein.
    
 
 0.715
FF38_00667
RNA-binding protein Rsf1.
   
 0.675
FF38_09886
RRM domain-containing protein.
   
 0.651
FF38_07409
RRM domain-containing protein.
   
 0.635
FF38_02933
Uncharacterized protein.
   
 0.592
FF38_05385
RNA-binding protein 1.
   
 0.592
FF38_07089
RRM domain-containing protein.
   
 0.590
FF38_03288
RNA-binding protein cabeza.
   
 0.551
Your Current Organism:
Lucilia cuprina
NCBI taxonomy Id: 7375
Other names: Australian sheep blowfly, L. cuprina, greenbottle fly
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