Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| FF38_01888 | FF38_06715 | A0A0L0BQ76 | A0A0L0C028 | Rab-GAP TBC domain-containing protein. | Rab3 GTPase-activating protein catalytic subunit. | 0.505 |
| FF38_01888 | FF38_12510 | A0A0L0BQ76 | A0A0L0C6D7 | Rab-GAP TBC domain-containing protein. | Rab3 GTPase-activating protein regulatory subunit. | 0.535 |
| FF38_04509 | FF38_06263 | A0A0L0BTR0 | A0A0L0C761 | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.686 |
| FF38_04509 | FF38_06715 | A0A0L0BTR0 | A0A0L0C028 | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | Rab3 GTPase-activating protein catalytic subunit. | 0.721 |
| FF38_04509 | FF38_07040 | A0A0L0BTR0 | A0A0L0CLT5 | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | Uncharacterized protein. | 0.584 |
| FF38_04509 | FF38_12510 | A0A0L0BTR0 | A0A0L0C6D7 | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | Rab3 GTPase-activating protein regulatory subunit. | 0.721 |
| FF38_04917 | FF38_06715 | A0A0L0C853 | A0A0L0C028 | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | Rab3 GTPase-activating protein catalytic subunit. | 0.665 |
| FF38_04917 | FF38_07040 | A0A0L0C853 | A0A0L0CLT5 | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | Uncharacterized protein. | 0.526 |
| FF38_04917 | FF38_11783 | A0A0L0C853 | A0A0L0BM17 | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | Uncharacterized protein. | 0.694 |
| FF38_04917 | FF38_12510 | A0A0L0C853 | A0A0L0C6D7 | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | Rab3 GTPase-activating protein regulatory subunit. | 0.650 |
| FF38_04917 | FF38_12868 | A0A0L0C853 | A0A0L0C805 | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | Uncharacterized protein. | 0.694 |
| FF38_04917 | FF38_13809 | A0A0L0C853 | A0A0L0BUP7 | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | Uncharacterized protein. | 0.888 |
| FF38_06263 | FF38_04509 | A0A0L0C761 | A0A0L0BTR0 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | 0.686 |
| FF38_06263 | FF38_06715 | A0A0L0C761 | A0A0L0C028 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | Rab3 GTPase-activating protein catalytic subunit. | 0.693 |
| FF38_06263 | FF38_07040 | A0A0L0C761 | A0A0L0CLT5 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | Uncharacterized protein. | 0.921 |
| FF38_06263 | FF38_12510 | A0A0L0C761 | A0A0L0C6D7 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | Rab3 GTPase-activating protein regulatory subunit. | 0.788 |
| FF38_06263 | FF38_14067 | A0A0L0C761 | A0A0L0C720 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | MAP kinase-activating death domain protein. | 0.633 |
| FF38_06715 | FF38_01888 | A0A0L0C028 | A0A0L0BQ76 | Rab3 GTPase-activating protein catalytic subunit. | Rab-GAP TBC domain-containing protein. | 0.505 |
| FF38_06715 | FF38_04509 | A0A0L0C028 | A0A0L0BTR0 | Rab3 GTPase-activating protein catalytic subunit. | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | 0.721 |
| FF38_06715 | FF38_04917 | A0A0L0C028 | A0A0L0C853 | Rab3 GTPase-activating protein catalytic subunit. | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | 0.665 |
page 1 of 3