STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FF38_02648Putative ATP-dependent RNA helicase Dbp45A; Belongs to the DEAD box helicase family. (538 aa)    
Predicted Functional Partners:
FF38_13771
RRM domain-containing protein.
   
 
 0.973
FF38_12937
Uncharacterized protein.
   
 0.966
FF38_01794
WD_REPEATS_REGION domain-containing protein.
   
 0.951
FF38_02827
Bystin.
   
 
 0.947
FF38_09843
Utp12 domain-containing protein.
   
 0.931
FF38_06493
Uncharacterized protein; Belongs to the DEAD box helicase family.
  
0.927
FF38_13012
Uncharacterized protein.
   
 0.926
FF38_05152
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.903
FF38_01816
Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.
   
 0.902
FF38_00068
Lipase_GDSL domain-containing protein.
   
 0.898
Your Current Organism:
Lucilia cuprina
NCBI taxonomy Id: 7375
Other names: Australian sheep blowfly, L. cuprina, greenbottle fly
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