STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FF38_09523WD_REPEATS_REGION domain-containing protein. (378 aa)    
Predicted Functional Partners:
FF38_12415
Putative vacuolar protein sorting-associated protein 51.
   
 
 0.885
FF38_10946
Uncharacterized protein.
    
 
 0.871
FF38_08073
Vacuolar protein sorting-associated protein 54.
    
 
 0.853
FF38_14329
Vps53_N domain-containing protein.
    
 
 0.852
FF38_05813
Uncharacterized protein.
    
 
 0.722
FF38_09525
Uncharacterized protein.
      
 0.647
FF38_07313
THO complex subunit 6.
    
 
 0.593
FF38_01080
Uncharacterized protein.
      
 0.530
FF38_03180
t-SNARE coiled-coil homology domain-containing protein.
      
 0.515
FF38_05919
Putative ribosome biogenesis protein BRX1.
      
 0.515
Your Current Organism:
Lucilia cuprina
NCBI taxonomy Id: 7375
Other names: Australian sheep blowfly, L. cuprina, greenbottle fly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.