FF38_10515 protein (Lucilia cuprina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

FF38_10515

Protein kinase domain-containing protein. (198 aa)

Predicted Functional Partners:

FF38_11249

0.937

FF38_06521

0.891

FF38_13831

0.876

FF38_05706

0.872

FF38_01615

0.831

FF38_12789

0.813

FF38_00189

0.763

FF38_12587

0.759

FF38_08209

0.728

FF38_03748

0.714

Your Current Organism:

Lucilia cuprina

NCBI taxonomy Id: 7375
Other names: Australian sheep blowfly, L. cuprina, greenbottle fly

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FF38_00189	FF38_10515	A0A0L0BRI1	A0A0L0CF30	Non-specific serine/threonine protein kinase.	Protein kinase domain-containing protein.	0.763
FF38_01615	FF38_10515	A0A0L0CF66	A0A0L0CF30	BZIP domain-containing protein.	Protein kinase domain-containing protein.	0.831
FF38_01615	FF38_11249	A0A0L0CF66	A0A0L0BLM6	BZIP domain-containing protein.	Dual specificity mitogen-activated protein kinase kinase dSOR1; Belongs to the protein kinase superfamily.	0.563
FF38_01615	FF38_12587	A0A0L0CF66	A0A0L0BMT9	BZIP domain-containing protein.	BZIP domain-containing protein.	0.752
FF38_01615	FF38_12789	A0A0L0CF66	A0A0L0CH31	BZIP domain-containing protein.	Uncharacterized protein.	0.490
FF38_03748	FF38_10515	A0A0L0CNH4	A0A0L0CF30	Uncharacterized protein.	Protein kinase domain-containing protein.	0.714
FF38_03748	FF38_11249	A0A0L0CNH4	A0A0L0BLM6	Uncharacterized protein.	Dual specificity mitogen-activated protein kinase kinase dSOR1; Belongs to the protein kinase superfamily.	0.986
FF38_05706	FF38_10515	A0A0L0C8K9	A0A0L0CF30	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Protein kinase domain-containing protein.	0.872
FF38_06521	FF38_08209	A0A0L0C5E4	A0A0L0CI88	MAP kinase-activated protein kinase 2; Belongs to the protein kinase superfamily.	Heat shock factor protein.	0.777
FF38_06521	FF38_10515	A0A0L0C5E4	A0A0L0CF30	MAP kinase-activated protein kinase 2; Belongs to the protein kinase superfamily.	Protein kinase domain-containing protein.	0.891
FF38_06521	FF38_13831	A0A0L0C5E4	A0A0L0BUV4	MAP kinase-activated protein kinase 2; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.754
FF38_08209	FF38_06521	A0A0L0CI88	A0A0L0C5E4	Heat shock factor protein.	MAP kinase-activated protein kinase 2; Belongs to the protein kinase superfamily.	0.777
FF38_08209	FF38_10515	A0A0L0CI88	A0A0L0CF30	Heat shock factor protein.	Protein kinase domain-containing protein.	0.728
FF38_10515	FF38_00189	A0A0L0CF30	A0A0L0BRI1	Protein kinase domain-containing protein.	Non-specific serine/threonine protein kinase.	0.763
FF38_10515	FF38_01615	A0A0L0CF30	A0A0L0CF66	Protein kinase domain-containing protein.	BZIP domain-containing protein.	0.831
FF38_10515	FF38_03748	A0A0L0CF30	A0A0L0CNH4	Protein kinase domain-containing protein.	Uncharacterized protein.	0.714
FF38_10515	FF38_05706	A0A0L0CF30	A0A0L0C8K9	Protein kinase domain-containing protein.	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.872
FF38_10515	FF38_06521	A0A0L0CF30	A0A0L0C5E4	Protein kinase domain-containing protein.	MAP kinase-activated protein kinase 2; Belongs to the protein kinase superfamily.	0.891
FF38_10515	FF38_08209	A0A0L0CF30	A0A0L0CI88	Protein kinase domain-containing protein.	Heat shock factor protein.	0.728
FF38_10515	FF38_11249	A0A0L0CF30	A0A0L0BLM6	Protein kinase domain-containing protein.	Dual specificity mitogen-activated protein kinase kinase dSOR1; Belongs to the protein kinase superfamily.	0.937