STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FF38_01106BrkDBD domain-containing protein. (722 aa)    
Predicted Functional Partners:
FF38_03972
Protein groucho.
    
 
 0.578
FF38_03179
Uncharacterized protein.
    
 
 0.565
FF38_09441
TGF_BETA_2 domain-containing protein.
      
 0.550
FF38_03953
Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
    
 
 0.501
FF38_09948
Dorsal-ventral patterning protein Sog; Belongs to the chordin family.
      
 0.472
FF38_06469
Optomotor-blind domain-containing protein.
      
 0.457
FF38_04765
Homeobox protein vnd.
      
 0.424
Your Current Organism:
Lucilia cuprina
NCBI taxonomy Id: 7375
Other names: Australian sheep blowfly, L. cuprina, greenbottle fly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.