FF38_12829 protein (Lucilia cuprina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

FF38_12829

Carrier domain-containing protein. (889 aa)

Predicted Functional Partners:

FF38_02474

0.971

FF38_10139

0.917

FF38_00229

0.892

FF38_10745

0.782

FF38_01432

0.782

FF38_11894

0.679

FF38_13054

0.651

FF38_13056

0.651

FF38_08018

0.651

FF38_03499

0.646

Your Current Organism:

Lucilia cuprina

NCBI taxonomy Id: 7375
Other names: Australian sheep blowfly, L. cuprina, greenbottle fly

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FF38_00229	FF38_02474	A0A0L0BVF6	A0A0L0BSZ1	Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.821
FF38_00229	FF38_10139	A0A0L0BVF6	A0A0L0BQB3	Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.	Uncharacterized protein.	0.892
FF38_00229	FF38_12829	A0A0L0BVF6	A0A0L0CGN6	Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.	Carrier domain-containing protein.	0.892
FF38_01432	FF38_02474	A0A0L0C9U0	A0A0L0BSZ1	Uncharacterized protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.981
FF38_01432	FF38_10139	A0A0L0C9U0	A0A0L0BQB3	Uncharacterized protein.	Uncharacterized protein.	0.782
FF38_01432	FF38_12829	A0A0L0C9U0	A0A0L0CGN6	Uncharacterized protein.	Carrier domain-containing protein.	0.782
FF38_02474	FF38_00229	A0A0L0BSZ1	A0A0L0BVF6	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.	0.821
FF38_02474	FF38_01432	A0A0L0BSZ1	A0A0L0C9U0	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Uncharacterized protein.	0.981
FF38_02474	FF38_03499	A0A0L0BSZ1	A0A0L0CIC7	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Uncharacterized protein.	0.695
FF38_02474	FF38_08018	A0A0L0BSZ1	A0A0L0BS22	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Carrier domain-containing protein.	0.695
FF38_02474	FF38_10139	A0A0L0BSZ1	A0A0L0BQB3	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Uncharacterized protein.	0.971
FF38_02474	FF38_10745	A0A0L0BSZ1	A0A0L0BTC0	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Protein-cysteine N-palmitoyltransferase Rasp; Belongs to the membrane-bound acyltransferase family.	0.981
FF38_02474	FF38_11894	A0A0L0BSZ1	A0A0L0BYB5	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.	0.512
FF38_02474	FF38_12829	A0A0L0BSZ1	A0A0L0CGN6	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Carrier domain-containing protein.	0.971
FF38_02474	FF38_13054	A0A0L0BSZ1	A0A0L0BMT1	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Carrier domain-containing protein.	0.695
FF38_02474	FF38_13056	A0A0L0BSZ1	A0A0L0BQ63	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Carrier domain-containing protein.	0.695
FF38_03499	FF38_02474	A0A0L0CIC7	A0A0L0BSZ1	Uncharacterized protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.695
FF38_03499	FF38_10139	A0A0L0CIC7	A0A0L0BQB3	Uncharacterized protein.	Uncharacterized protein.	0.646
FF38_03499	FF38_11894	A0A0L0CIC7	A0A0L0BYB5	Uncharacterized protein.	Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.	0.420
FF38_03499	FF38_12829	A0A0L0CIC7	A0A0L0CGN6	Uncharacterized protein.	Carrier domain-containing protein.	0.646