Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FF38_01618 | FF38_01750 | A0A0L0CF97 | A0A0L0CBP7 | CYCLIN domain-containing protein; Belongs to the cyclin family. | CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. | 0.998 |
FF38_01618 | FF38_06256 | A0A0L0CF97 | A0A0L0C6M2 | CYCLIN domain-containing protein; Belongs to the cyclin family. | Uncharacterized protein. | 0.513 |
FF38_01618 | FF38_07149 | A0A0L0CF97 | A0A0L0CLB8 | CYCLIN domain-containing protein; Belongs to the cyclin family. | Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. | 0.993 |
FF38_01618 | FF38_08861 | A0A0L0CF97 | A0A0L0BR20 | CYCLIN domain-containing protein; Belongs to the cyclin family. | DNA excision repair protein haywire. | 0.989 |
FF38_01618 | FF38_11952 | A0A0L0CF97 | A0A0L0CDV9 | CYCLIN domain-containing protein; Belongs to the cyclin family. | General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | 0.988 |
FF38_01618 | FF38_11960 | A0A0L0CF97 | A0A0L0CE92 | CYCLIN domain-containing protein; Belongs to the cyclin family. | HTH TFE/IIEalpha-type domain-containing protein. | 0.993 |
FF38_01618 | FF38_12162 | A0A0L0CF97 | A0A0L0BUY2 | CYCLIN domain-containing protein; Belongs to the cyclin family. | Helicase ATP-binding domain-containing protein. | 0.996 |
FF38_01618 | FF38_12265 | A0A0L0CF97 | A0A0L0CRY2 | CYCLIN domain-containing protein; Belongs to the cyclin family. | General transcription factor IIH subunit. | 0.991 |
FF38_01618 | FF38_12401 | A0A0L0CF97 | A0A0L0CK24 | CYCLIN domain-containing protein; Belongs to the cyclin family. | General transcription factor IIH subunit 1. | 0.989 |
FF38_01618 | FF38_14271 | A0A0L0CF97 | A0A0L0CG27 | CYCLIN domain-containing protein; Belongs to the cyclin family. | Uncharacterized protein. | 0.998 |
FF38_01750 | FF38_01618 | A0A0L0CBP7 | A0A0L0CF97 | CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. | CYCLIN domain-containing protein; Belongs to the cyclin family. | 0.998 |
FF38_01750 | FF38_07149 | A0A0L0CBP7 | A0A0L0CLB8 | CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. | Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. | 0.996 |
FF38_01750 | FF38_08861 | A0A0L0CBP7 | A0A0L0BR20 | CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. | DNA excision repair protein haywire. | 0.997 |
FF38_01750 | FF38_11952 | A0A0L0CBP7 | A0A0L0CDV9 | CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. | General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | 0.997 |
FF38_01750 | FF38_11960 | A0A0L0CBP7 | A0A0L0CE92 | CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. | HTH TFE/IIEalpha-type domain-containing protein. | 0.995 |
FF38_01750 | FF38_12162 | A0A0L0CBP7 | A0A0L0BUY2 | CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. | Helicase ATP-binding domain-containing protein. | 0.997 |
FF38_01750 | FF38_12265 | A0A0L0CBP7 | A0A0L0CRY2 | CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. | General transcription factor IIH subunit. | 0.998 |
FF38_01750 | FF38_12401 | A0A0L0CBP7 | A0A0L0CK24 | CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. | General transcription factor IIH subunit 1. | 0.997 |
FF38_01750 | FF38_14271 | A0A0L0CBP7 | A0A0L0CG27 | CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. | Uncharacterized protein. | 0.997 |
FF38_06256 | FF38_01618 | A0A0L0C6M2 | A0A0L0CF97 | Uncharacterized protein. | CYCLIN domain-containing protein; Belongs to the cyclin family. | 0.513 |
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