STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FF38_07769Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (662 aa)    
Predicted Functional Partners:
FF38_03506
Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family.
   
 0.953
FF38_06495
Putative vacuolar protein sorting-associated protein 18.
   
 0.952
FF38_10779
CNH domain-containing protein.
   
 0.949
FF38_03150
RING-type domain-containing protein.
   
 0.944
FF38_02345
Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways; Belongs to the VPS41 family.
    
 0.943
FF38_12798
Vps16_C domain-containing protein.
   
 
 0.925
FF38_07309
RING-type domain-containing protein.
    
 
 0.922
FF38_05517
Uncharacterized protein.
    
 
 0.919
FF38_05598
t-SNARE coiled-coil homology domain-containing protein.
    
 
 0.917
FF38_00125
Uncharacterized protein.
    
 
 0.916
Your Current Organism:
Lucilia cuprina
NCBI taxonomy Id: 7375
Other names: Australian sheep blowfly, L. cuprina, greenbottle fly
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