STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FF38_06056KH_dom_type_1 domain-containing protein. (178 aa)    
Predicted Functional Partners:
FF38_12319
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 
 0.483
FF38_09215
Uncharacterized protein; Belongs to the EF-1-beta/EF-1-delta family.
   
   0.465
FF38_14147
Elongation factor 1-gamma.
   
   0.463
FF38_03156
Putative ATP-dependent RNA helicase me31b; Belongs to the DEAD box helicase family.
   
 
 0.462
FF38_01365
Plug_translocon domain-containing protein.
   
    0.440
FF38_14122
Bifunctional glutamate/proline--tRNA ligase.
   
   0.440
FF38_08474
Guanine nucleotide-binding protein subunit beta-like protein.
   
 
 0.428
FF38_14307
Guanine nucleotide-binding protein subunit beta-like protein.
   
 
 0.428
EIF6
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.
      
 0.412
Your Current Organism:
Lucilia cuprina
NCBI taxonomy Id: 7375
Other names: Australian sheep blowfly, L. cuprina, greenbottle fly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.