STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FF38_05013Uncharacterized protein. (681 aa)    
Predicted Functional Partners:
FF38_07904
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.786
FF38_10052
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
    
 0.638
FF38_01296
Ubiquitin-like domain-containing protein.
    
 0.525
FF38_04662
ANK_REP_REGION domain-containing protein.
  
  0.510
FF38_01689
ANK_REP_REGION domain-containing protein.
  
 
  0.503
FF38_01460
ANK_REP_REGION domain-containing protein.
  
 
  0.502
FF38_00666
Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.
    
 0.500
FF38_14280
PPM-type phosphatase domain-containing protein.
   
 
 0.500
FF38_09706
COMM domain-containing protein.
    
  0.493
FF38_09457
ANK_REP_REGION domain-containing protein.
  
 
  0.484
Your Current Organism:
Lucilia cuprina
NCBI taxonomy Id: 7375
Other names: Australian sheep blowfly, L. cuprina, greenbottle fly
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