STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y3MY38HTH TFE/IIEalpha-type domain-containing protein. (303 aa)    
Predicted Functional Partners:
A0A1Y3NBB6
Uncharacterized protein.
   
 0.998
A0A1Y3MYE1
Uncharacterized protein.
   
 0.994
A0A1Y3N564
General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.
   
 0.994
A0A1Y3NGI5
Uncharacterized protein.
   
 0.994
A0A1Y3NK73
Uncharacterized protein.
   
 0.994
A0A1Y3NSM7
RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
   
 0.994
A0A1Y3NFJ1
Uncharacterized protein.
   
 0.993
A0A1Y3NP41
Cyclin_C_2 domain-containing protein.
    
 0.992
A0A1Y3N5P0
RNA_pol_Rpb5_C domain-containing protein.
    
 0.991
A0A1Y3NN70
SHS2_Rpb7-N domain-containing protein.
    
 0.989
Your Current Organism:
Piromyces sp. E2
NCBI taxonomy Id: 73868
Other names: P. sp. E2
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