STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y3N742SAM domain-containing protein. (1170 aa)    
Predicted Functional Partners:
A0A1Y3MMS5
Uncharacterized protein.
   
   0.782
A0A1Y3N9P7
WD_REPEATS_REGION domain-containing protein.
   
 
 0.661
A0A1Y3NMQ9
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
   0.564
A0A1Y3MPW3
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 
 0.521
A0A1Y3MNP0
AA_TRNA_LIGASE_II domain-containing protein.
   
   0.465
A0A1Y3N1N0
Uncharacterized protein.
    
 
 0.417
A0A1Y3N9T2
Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.
   
    0.408
Your Current Organism:
Piromyces sp. E2
NCBI taxonomy Id: 73868
Other names: P. sp. E2
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