A0A1Y3NMT7 protein (Piromyces sp. E2) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A1Y3NMT7

TP_methylase domain-containing protein. (282 aa)

Predicted Functional Partners:

A0A1Y3N9X1

0.978

A0A1Y3NNT6

0.833

A0A1Y3NAW5

0.806

A0A1Y3NJQ7

0.806

A0A1Y3MYD1

0.628

A0A1Y3MNG2

0.610

A0A1Y3NFA4

0.593

A0A1Y3MX60

0.589

A0A1Y3N5Z6

0.472

A0A1Y3NM13

0.455

Your Current Organism:

Piromyces sp. E2

NCBI taxonomy Id: 73868
Other names: P. sp. E2

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1Y3MNG2	A0A1Y3N9X1	AA_TRNA_LIGASE_II domain-containing protein.	Tr-type G domain-containing protein.	0.540
A0A1Y3MNG2	A0A1Y3NAW5	AA_TRNA_LIGASE_II domain-containing protein.	Tr-type G domain-containing protein.	0.540
A0A1Y3MNG2	A0A1Y3NFA4	AA_TRNA_LIGASE_II domain-containing protein.	Uncharacterized protein.	0.431
A0A1Y3MNG2	A0A1Y3NJQ7	AA_TRNA_LIGASE_II domain-containing protein.	Tr-type G domain-containing protein.	0.540
A0A1Y3MNG2	A0A1Y3NMT7	AA_TRNA_LIGASE_II domain-containing protein.	TP_methylase domain-containing protein.	0.610
A0A1Y3MX60	A0A1Y3NFA4	Glutamine amidotransferase type-2 domain-containing protein.	Uncharacterized protein.	0.601
A0A1Y3MX60	A0A1Y3NMT7	Glutamine amidotransferase type-2 domain-containing protein.	TP_methylase domain-containing protein.	0.589
A0A1Y3MYD1	A0A1Y3NM13	Uncharacterized protein.	Brix domain-containing protein.	0.830
A0A1Y3MYD1	A0A1Y3NMT7	Uncharacterized protein.	TP_methylase domain-containing protein.	0.628
A0A1Y3N5Z6	A0A1Y3N9X1	Uncharacterized protein.	Tr-type G domain-containing protein.	0.827
A0A1Y3N5Z6	A0A1Y3NAW5	Uncharacterized protein.	Tr-type G domain-containing protein.	0.801
A0A1Y3N5Z6	A0A1Y3NFA4	Uncharacterized protein.	Uncharacterized protein.	0.575
A0A1Y3N5Z6	A0A1Y3NJQ7	Uncharacterized protein.	Tr-type G domain-containing protein.	0.801
A0A1Y3N5Z6	A0A1Y3NM13	Uncharacterized protein.	Brix domain-containing protein.	0.456
A0A1Y3N5Z6	A0A1Y3NMT7	Uncharacterized protein.	TP_methylase domain-containing protein.	0.472
A0A1Y3N9X1	A0A1Y3MNG2	Tr-type G domain-containing protein.	AA_TRNA_LIGASE_II domain-containing protein.	0.540
A0A1Y3N9X1	A0A1Y3N5Z6	Tr-type G domain-containing protein.	Uncharacterized protein.	0.827
A0A1Y3N9X1	A0A1Y3NFA4	Tr-type G domain-containing protein.	Uncharacterized protein.	0.509
A0A1Y3N9X1	A0A1Y3NMT7	Tr-type G domain-containing protein.	TP_methylase domain-containing protein.	0.978
A0A1Y3N9X1	A0A1Y3NNT6	Tr-type G domain-containing protein.	2-(3-amino-3-carboxypropyl)histidine synthase subunit 2; Required for the first step in the synthesis of diphthamide, a post-translational modification of histidine which occurs in translation elongation factor 2; Belongs to the DPH1/DPH2 family. DPH2 subfamily.	0.960