Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFC98412.1 | SFD11899.1 | SAMN05216297_103343 | SAMN05216297_104307 | pRiA4b ORF-3-like protein. | Putative porin. | 0.711 |
SFC98412.1 | SFD16614.1 | SAMN05216297_103343 | SAMN05216297_10560 | pRiA4b ORF-3-like protein. | Family of unknown function. | 0.682 |
SFC98412.1 | SFD28184.1 | SAMN05216297_103343 | SAMN05216297_106204 | pRiA4b ORF-3-like protein. | Surface antigen. | 0.700 |
SFC98412.1 | SFD36144.1 | SAMN05216297_103343 | SAMN05216297_10789 | pRiA4b ORF-3-like protein. | Hypothetical protein. | 0.702 |
SFC98412.1 | SFD37511.1 | SAMN05216297_103343 | SAMN05216297_107147 | pRiA4b ORF-3-like protein. | Ig-like domain-containing protein. | 0.720 |
SFC98412.1 | SFD70119.1 | SAMN05216297_103343 | SAMN05216297_11114 | pRiA4b ORF-3-like protein. | Tetratricopeptide repeat-containing protein. | 0.564 |
SFC98412.1 | SFE03614.1 | SAMN05216297_103343 | SAMN05216297_11897 | pRiA4b ORF-3-like protein. | Protein of unknown function. | 0.770 |
SFC98412.1 | rimP | SAMN05216297_103343 | SAMN05216297_10617 | pRiA4b ORF-3-like protein. | Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.435 |
SFD11899.1 | SFC98412.1 | SAMN05216297_104307 | SAMN05216297_103343 | Putative porin. | pRiA4b ORF-3-like protein. | 0.711 |
SFD11899.1 | SFD16614.1 | SAMN05216297_104307 | SAMN05216297_10560 | Putative porin. | Family of unknown function. | 0.751 |
SFD11899.1 | SFD16765.1 | SAMN05216297_104307 | SAMN05216297_10567 | Putative porin. | LPS assembly outer membrane protein LptD (organic solvent tolerance protein OstA). | 0.566 |
SFD11899.1 | SFD28184.1 | SAMN05216297_104307 | SAMN05216297_106204 | Putative porin. | Surface antigen. | 0.761 |
SFD11899.1 | SFD36144.1 | SAMN05216297_104307 | SAMN05216297_10789 | Putative porin. | Hypothetical protein. | 0.654 |
SFD11899.1 | SFD37511.1 | SAMN05216297_104307 | SAMN05216297_107147 | Putative porin. | Ig-like domain-containing protein. | 0.707 |
SFD11899.1 | SFD70119.1 | SAMN05216297_104307 | SAMN05216297_11114 | Putative porin. | Tetratricopeptide repeat-containing protein. | 0.642 |
SFD11899.1 | SFE03614.1 | SAMN05216297_104307 | SAMN05216297_11897 | Putative porin. | Protein of unknown function. | 0.434 |
SFD16614.1 | SFC98412.1 | SAMN05216297_10560 | SAMN05216297_103343 | Family of unknown function. | pRiA4b ORF-3-like protein. | 0.682 |
SFD16614.1 | SFD11899.1 | SAMN05216297_10560 | SAMN05216297_104307 | Family of unknown function. | Putative porin. | 0.751 |
SFD16614.1 | SFD16765.1 | SAMN05216297_10560 | SAMN05216297_10567 | Family of unknown function. | LPS assembly outer membrane protein LptD (organic solvent tolerance protein OstA). | 0.636 |
SFD16614.1 | SFD24846.1 | SAMN05216297_10560 | SAMN05216297_10623 | Family of unknown function. | Protein of unknown function. | 0.480 |
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