STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1B0A7K9Uncharacterized protein. (230 aa)    
Predicted Functional Partners:
A0A1A9Z9F8
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.966
A0A1A9Z0L6
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 0.944
A0A1A9ZNY0
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
   
 0.931
A0A1A9ZU78
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
   
 0.931
A0A1B0AEE3
MIF4G domain-containing protein.
   
 0.875
A0A1A9ZA16
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
    
 0.819
A0A1A9Z277
W2 domain-containing protein.
   
 0.817
A0A1A9ZT23
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.792
A0A1A9ZUN7
MI domain-containing protein.
   
 0.785
A0A1B0A379
Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. Also involved in innate immunity via the short interfering RNAs (siRNAs) processing machinery by restricting the viral RNA production. In the CBC complex, Cbp20 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requ [...]
    
 0.785
Your Current Organism:
Glossina pallidipes
NCBI taxonomy Id: 7398
Other names: G. pallidipes
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