A0A1B0ABM9 protein (Glossina pallidipes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A1B0ABM9

MPN domain-containing protein. (2396 aa)

Predicted Functional Partners:

A0A1A9ZDE9

0.999

A0A1A9ZUB3

0.998

A0A1A9ZJ49

0.997

A0A1A9Z4K4

0.996

A0A1A9ZTF6

0.996

A0A1B0AAE5

0.996

A0A1B0AE47

0.996

A0A1A9ZCT5

0.995

A0A1A9ZIB9

0.995

A0A1A9ZXF3

0.995

Your Current Organism:

Glossina pallidipes

NCBI taxonomy Id: 7398
Other names: G. pallidipes

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1A9Z4K4	A0A1A9ZCT5	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.	0.984
A0A1A9Z4K4	A0A1A9ZDE9	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	Uncharacterized protein.	0.995
A0A1A9Z4K4	A0A1A9ZIB9	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	PID domain-containing protein.	0.999
A0A1A9Z4K4	A0A1A9ZJ49	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	Uncharacterized protein.	0.989
A0A1A9Z4K4	A0A1A9ZTF6	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein Sm D3.	0.999
A0A1A9Z4K4	A0A1A9ZUB3	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	Uncharacterized protein.	0.994
A0A1A9Z4K4	A0A1A9ZXF3	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	Sm domain-containing protein.	0.999
A0A1A9Z4K4	A0A1B0AAE5	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein Sm D2.	0.999
A0A1A9Z4K4	A0A1B0ABM9	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	MPN domain-containing protein.	0.996
A0A1A9Z4K4	A0A1B0AE47	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	Sm domain-containing protein; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
A0A1A9ZCT5	A0A1A9Z4K4	Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.984
A0A1A9ZCT5	A0A1A9ZDE9	Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.	Uncharacterized protein.	0.998
A0A1A9ZCT5	A0A1A9ZIB9	Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.	PID domain-containing protein.	0.986
A0A1A9ZCT5	A0A1A9ZJ49	Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.	Uncharacterized protein.	0.996
A0A1A9ZCT5	A0A1A9ZTF6	Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.	Small nuclear ribonucleoprotein Sm D3.	0.994
A0A1A9ZCT5	A0A1A9ZUB3	Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.	Uncharacterized protein.	0.998
A0A1A9ZCT5	A0A1A9ZXF3	Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.	Sm domain-containing protein.	0.986
A0A1A9ZCT5	A0A1B0AAE5	Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.	Small nuclear ribonucleoprotein Sm D2.	0.986
A0A1A9ZCT5	A0A1B0ABM9	Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.	MPN domain-containing protein.	0.995
A0A1A9ZCT5	A0A1B0AE47	Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.	Sm domain-containing protein; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.984