STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sufS_2Cysteine desulfurase family protein, VC1184 subfamily. (427 aa)    
Predicted Functional Partners:
SEL97917.1
NifU homolog involved in Fe-S cluster formation.
  
 0.992
sufE
Cysteine desulfuration protein SufE.
 0.968
SEM41429.1
Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family.
    
   0.915
SEN73615.1
Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family.
    
   0.915
sufC
Fe-S cluster assembly ATP-binding protein.
  
 0.891
sufB
Iron-regulated ABC transporter membrane component SufB.
 
 0.888
sufD
Iron-regulated ABC transporter permease protein SufD.
 
 0.880
selD
Selenophosphate synthase.
    
 0.761
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
    
  0.747
trxB
Thioredoxin reductase (NADPH).
  
 
 0.702
Your Current Organism:
Roseovarius tolerans
NCBI taxonomy Id: 74031
Other names: CIP 106398, DSM 11457, IFO 16695, JCM 21346, NBRC 16695, R. tolerans, strain EL-172
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.