STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM37444.1Amino acid/amide ABC transporter substrate-binding protein, HAAT family. (448 aa)    
Predicted Functional Partners:
livH_5
Amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-); Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.955
metN_2
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
 
 
  0.954
SEM37380.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.948
livF_5
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.
 
 
  0.934
livK
Branched-chain amino acid transport system substrate-binding protein.
  
  
  0.737
SEM25189.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 
  0.712
lptB_3
Branched-chain amino acid transport system ATP-binding protein.
 
 
  0.674
SEM60701.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
   
 
  0.671
SEM37478.1
Hypothetical protein.
 
     0.638
cysA_2
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
  
 
  0.627
Your Current Organism:
Roseovarius tolerans
NCBI taxonomy Id: 74031
Other names: CIP 106398, DSM 11457, IFO 16695, JCM 21346, NBRC 16695, R. tolerans, strain EL-172
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.