STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cobTCobaltochelatase CobT subunit. (625 aa)    
Predicted Functional Partners:
cobS_1
Cobaltochelatase CobS subunit.
 
 
 0.992
SEM42202.1
cob(I)alamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
    
  0.922
cobN_1
Cobaltochelatase CobN subunit.
     
 0.868
dnaJ_1
DnaJ domain-containing protein.
 
     0.750
SEM69943.1
GcrA cell cycle regulator.
  
     0.709
SEM51109.1
Hypothetical protein.
  
     0.605
atpF
ATP synthase F0 subcomplex B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
     0.604
SEN09980.1
Chaperone required for the assembly of the F1-ATPase.
  
     0.598
SEM38384.1
ATP-dependent RNA helicase SUPV3L1/SUV3.
  
     0.594
SEM22940.1
Hypothetical protein.
  
     0.592
Your Current Organism:
Roseovarius tolerans
NCBI taxonomy Id: 74031
Other names: CIP 106398, DSM 11457, IFO 16695, JCM 21346, NBRC 16695, R. tolerans, strain EL-172
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.