STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM39489.1FAD/FMN-containing dehydrogenase. (470 aa)    
Predicted Functional Partners:
hndC
Formate dehydrogenase.
   
   0.804
lutA
Glycolate oxidase iron-sulfur subunit.
 
 0.695
plsB
Glycerol-3-phosphate acyltransferase.
    
 0.683
etfB
Electron transfer flavoprotein beta subunit.
 
 
 0.682
etfA
Electron transfer flavoprotein alpha subunit apoprotein.
 
 
 0.674
gltB_1
Glutamate synthase (NADPH) large subunit.
    
 0.670
SEN11952.1
Glycolate oxidase FAD binding subunit.
  
 
0.665
lldD_1
L-lactate dehydrogenase (cytochrome).
 
 0.657
mdlB
L-lactate dehydrogenase (cytochrome).
 
 0.657
lldD_2
L-lactate dehydrogenase (cytochrome).
 
 0.657
Your Current Organism:
Roseovarius tolerans
NCBI taxonomy Id: 74031
Other names: CIP 106398, DSM 11457, IFO 16695, JCM 21346, NBRC 16695, R. tolerans, strain EL-172
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.