STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM35523.1Polyhydroxyalkanoate synthesis repressor PhaR. (185 aa)    
Predicted Functional Partners:
SEM35559.1
Hypothetical protein.
 
   
 0.919
phbC_1
Polyhydroxyalkanoate synthase.
 
   
 0.862
SEM35635.1
Poly(3-hydroxybutyrate) depolymerase.
 
   
 0.847
gltR
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
       0.773
phbC_2
Polyhydroxyalkanoate synthase.
 
   
 0.773
fur
Manganese uptake regulator, Fur family; Belongs to the Fur family.
      
 0.642
perR
Fur family transcriptional regulator, iron response regulator; Belongs to the Fur family.
      
 0.642
SEN31112.1
NTE family protein.
 
     0.599
phbB
3-oxoacyl-[acyl-carrier-protein] reductase.
  
   
 0.529
scpA_2
methylmalonyl-CoA mutase.
      
 0.424
Your Current Organism:
Roseovarius tolerans
NCBI taxonomy Id: 74031
Other names: CIP 106398, DSM 11457, IFO 16695, JCM 21346, NBRC 16695, R. tolerans, strain EL-172
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.