STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM52235.1Formate dehydrogenase region TAT target. (63 aa)    
Predicted Functional Partners:
SEM52205.1
Chaperone TorD involved in molybdoenzyme TorA maturation.
 
   
 0.937
SEM52129.1
Protein of unknown function.
 
     0.934
SEM52170.1
Protein of unknown function.
 
     0.934
fdoI
Formate dehydrogenase gamma subunit.
 
    0.872
SEM52094.1
4Fe-4S dicluster domain-containing protein.
 
     0.867
cycA_2
Cytochrome c.
 
     0.837
fdhF
Formate dehydrogenase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
     0.829
SEM51917.1
Hypothetical protein.
 
     0.791
SEM51947.1
Biotin-(acetyl-CoA carboxylase) ligase.
 
     0.784
SEM52057.1
Hypothetical protein.
  
     0.772
Your Current Organism:
Roseovarius tolerans
NCBI taxonomy Id: 74031
Other names: CIP 106398, DSM 11457, IFO 16695, JCM 21346, NBRC 16695, R. tolerans, strain EL-172
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.