STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM70249.1Putative hemolysin. (295 aa)    
Predicted Functional Partners:
phoR_3
Two-component system, OmpR family, sensor histidine kinase ChvG.
 
     0.712
ptsO
Phosphocarrier protein.
       0.671
manX
PTS system, mannose-specific IIA component.
       0.648
SEM70136.1
UPF0042 nucleotide-binding protein; Displays ATPase and GTPase activities.
       0.644
hprK
Hpr(Ser) kinase/phosphatase.
       0.621
baeR
Two component transcriptional regulator, winged helix family.
       0.551
epsN
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
  
     0.523
SEM42303.1
Hypothetical protein.
 
     0.448
wbpE
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
  
     0.447
SEN78837.1
Lyso-ornithine lipid acyltransferase.
  
  
 0.443
Your Current Organism:
Roseovarius tolerans
NCBI taxonomy Id: 74031
Other names: CIP 106398, DSM 11457, IFO 16695, JCM 21346, NBRC 16695, R. tolerans, strain EL-172
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