STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM68478.1CofD-related protein, GAK system. (395 aa)    
Predicted Functional Partners:
SEM68673.1
HprK-related kinase B.
 
    0.899
SEM68588.1
Phosphotransferase enzyme family protein.
 
    0.894
SEM68796.1
amphi-Trp domain-containing protein.
 
     0.889
SEM68635.1
Ribosomal protein S6--L-glutamate ligase.
 
   
 0.889
SEM70136.1
UPF0042 nucleotide-binding protein; Displays ATPase and GTPase activities.
 
  
 0.877
SEM68534.1
ADP-ribose pyrophosphatase YjhB, NUDIX family.
 
    0.704
SEM73898.1
Haem-NO-binding.
    
 0.634
SEN74842.1
Serine/threonine protein phosphatase PrpC.
  
  
 0.622
SEM68717.1
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase.
       0.561
SEM68752.1
Calcineurin-like phosphoesterase.
       0.554
Your Current Organism:
Roseovarius tolerans
NCBI taxonomy Id: 74031
Other names: CIP 106398, DSM 11457, IFO 16695, JCM 21346, NBRC 16695, R. tolerans, strain EL-172
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.