STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM68635.1Ribosomal protein S6--L-glutamate ligase. (293 aa)    
Predicted Functional Partners:
SEM68673.1
HprK-related kinase B.
 
     0.955
SEM68588.1
Phosphotransferase enzyme family protein.
 
     0.950
SEM68796.1
amphi-Trp domain-containing protein.
 
     0.945
SEM68478.1
CofD-related protein, GAK system.
 
   
 0.889
SEM68534.1
ADP-ribose pyrophosphatase YjhB, NUDIX family.
 
   
 0.882
SEM68717.1
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase.
       0.808
SEM68752.1
Calcineurin-like phosphoesterase.
  
    0.783
gltB_1
Glutamate synthase (NADPH) large subunit.
    
  0.694
SEN43815.1
Hypothetical protein.
 
     0.621
SEN28058.1
Cyanophycin synthetase.
    
 0.567
Your Current Organism:
Roseovarius tolerans
NCBI taxonomy Id: 74031
Other names: CIP 106398, DSM 11457, IFO 16695, JCM 21346, NBRC 16695, R. tolerans, strain EL-172
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.