STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yfkN_1Sulfate thiol esterase SoxB; Belongs to the 5'-nucleotidase family. (565 aa)    
Predicted Functional Partners:
SEM88838.1
Sulfur-oxidizing protein SoxZ.
 
 
 0.999
SEM88870.1
Thiosulfate-binding protein SoxY.
 
 
 0.999
SEM88688.1
Sulfur dehydrogenase subunit SoxD.
 
  
 0.998
SEM88722.1
Sulfur dehydrogenase subunit SoxC.
 
  
 0.998
soxA_2
Sulfur-oxidizing protein SoxA.
 
  
 0.997
SEM88906.1
Monoheme cytochrome SoxX (sulfur oxidation).
 
  
 0.995
SEM81981.1
Sulfur-oxidizing protein SoxY.
   
 0.967
SEM82349.1
Sulfur-oxidizing protein SoxY.
   
 0.967
sseA
Thiosulfate/3-mercaptopyruvate sulfurtransferase.
    
 0.949
cysC
Sulfate adenylyltransferase; Catalyzes the synthesis of activated sulfate.
    
  0.931
Your Current Organism:
Roseovarius tolerans
NCBI taxonomy Id: 74031
Other names: CIP 106398, DSM 11457, IFO 16695, JCM 21346, NBRC 16695, R. tolerans, strain EL-172
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.