STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bioFSerine palmitoyltransferase. (402 aa)    
Predicted Functional Partners:
SEM95037.1
fatty-acyl-CoA synthase.
 
  0.988
SEM94991.1
Nucleoside-diphosphate-sugar epimerase.
 
  0.958
SEM94959.1
Acyl carrier protein.
 
 
 0.931
fabD
[Acyl-carrier-protein] S-malonyltransferase.
 
 
 0.911
SEN31213.1
GAF domain-containing protein.
  
 
 0.821
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
 
 0.801
SEM94664.1
Hypothetical protein.
     0.780
SEM94435.1
Diacylglycerol kinase family enzyme.
 
 
 
 0.746
ppsE
Acyl transferase domain-containing protein.
 
 0.744
SEM94472.1
Hypothetical protein.
 
     0.685
Your Current Organism:
Roseovarius tolerans
NCBI taxonomy Id: 74031
Other names: CIP 106398, DSM 11457, IFO 16695, JCM 21346, NBRC 16695, R. tolerans, strain EL-172
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.