STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN05010.1Protein of unknown function. (316 aa)    
Predicted Functional Partners:
SEN05091.1
5-bromo-4-chloroindolyl phosphate hydrolysis protein.
 
     0.935
SEN05049.1
Uncharacterized conserved protein YaaN involved in tellurite resistance; Belongs to the TelA family.
 
     0.898
SEN04984.1
Membrane protease subunit, stomatin/prohibitin family, contains C-terminal Zn-ribbon domain.
 
     0.822
SEN20127.1
Hypothetical protein.
  
     0.711
SEN04952.1
Hypothetical protein.
       0.704
SEN38604.1
Hypothetical protein.
  
     0.660
SEN83381.1
Hypothetical protein.
  
     0.611
SEM54588.1
Protein of unknown function.
  
     0.590
SEN42660.1
Hypothetical protein.
  
     0.573
SEM11335.1
Squalene/phytoene synthase.
  
     0.567
Your Current Organism:
Roseovarius tolerans
NCBI taxonomy Id: 74031
Other names: CIP 106398, DSM 11457, IFO 16695, JCM 21346, NBRC 16695, R. tolerans, strain EL-172
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