STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN33823.1Carbohydrate ABC transporter substrate-binding protein, CUT1 family. (572 aa)    
Predicted Functional Partners:
sugB
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.996
ugpA_1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.987
sugC_2
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
 0.987
sugC_1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
 0.987
SEN33866.1
Predicted small integral membrane protein.
 
    0.944
lacF
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
 0.892
ugpA_2
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
 0.892
ugpC_2
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  
 0.858
ugpC_1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
  
 0.858
araQ
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
 0.826
Your Current Organism:
Roseovarius tolerans
NCBI taxonomy Id: 74031
Other names: CIP 106398, DSM 11457, IFO 16695, JCM 21346, NBRC 16695, R. tolerans, strain EL-172
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.