STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN41733.1Flp pilus assembly protein TadD, contains TPR repeats. (284 aa)    
Predicted Functional Partners:
SEN41694.1
Prepilin peptidase CpaA.
 
   
 0.965
SEN41769.1
Tetratricopeptide repeat-containing protein.
 
     0.949
SEN41651.1
Hypothetical protein.
 
     0.920
SEN41886.1
Tight adherence protein B.
 
  
 0.873
SEN41974.1
Pilus assembly protein CpaE.
 
  
 0.868
SEN41847.1
Tight adherence protein C.
 
  
 0.831
pulD
Pilus assembly protein CpaC; Belongs to the bacterial secretin family.
 
  
 0.830
SEN42103.1
Pilus assembly protein CpaB.
 
  
 0.809
SEN42154.1
Flp pilus assembly protein, pilin Flp.
 
  
 0.775
SEN42011.1
OmpA family protein.
 
     0.753
Your Current Organism:
Roseovarius tolerans
NCBI taxonomy Id: 74031
Other names: CIP 106398, DSM 11457, IFO 16695, JCM 21346, NBRC 16695, R. tolerans, strain EL-172
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.