STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tyrBAromatic amino acid aminotransferase apoenzyme. (394 aa)    
Predicted Functional Partners:
sseA
Thiosulfate/3-mercaptopyruvate sulfurtransferase.
 
  
 0.987
pheA
Prephenate dehydratase.
    
 0.974
SEM98379.1
Cyclohexadieny/prephenate dehydrogenase.
    
 0.967
mdh_2
Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
   
 0.964
gdhA
Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 0.957
gltB_1
Glutamate synthase (NADPH) large subunit.
 
  
 0.942
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
 0.941
gltD
Glutamate synthase (NADPH) small subunit.
 
  
  0.940
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
   
 
 0.936
SEN21181.1
Aspartate aminotransferase.
   
 0.935
Your Current Organism:
Roseovarius tolerans
NCBI taxonomy Id: 74031
Other names: CIP 106398, DSM 11457, IFO 16695, JCM 21346, NBRC 16695, R. tolerans, strain EL-172
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.