STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nsrR_2Transcriptional regulator, BadM/Rrf2 family. (137 aa)    
Predicted Functional Partners:
nifS
Cysteine desulfurase.
  
 
 0.852
SEN52157.1
Uncharacterized protein involved in response to NO.
 
  
 0.744
SEN52099.1
Uncharacterized membrane protein.
 
     0.598
SEN52210.1
5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
       0.536
fldA
NADPH-dependent FMN reductase.
       0.519
SEL97917.1
NifU homolog involved in Fe-S cluster formation.
  
  
 0.508
fliG
Flagellar motor switch protein FliG.
    
   0.504
SEM26330.1
Cytochrome c oxidase cbb3-type subunit 1; Belongs to the heme-copper respiratory oxidase family.
  
  
 0.464
SEM95474.1
Hypothetical protein.
   
    0.445
SEN06262.1
Hypothetical protein.
   
    0.445
Your Current Organism:
Roseovarius tolerans
NCBI taxonomy Id: 74031
Other names: CIP 106398, DSM 11457, IFO 16695, JCM 21346, NBRC 16695, R. tolerans, strain EL-172
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