STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN58127.1Hypothetical protein. (167 aa)    
Predicted Functional Partners:
coxM_3
Carbon-monoxide dehydrogenase medium subunit.
 
 
 0.870
cutL
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 
 0.856
coxL
Carbon-monoxide dehydrogenase large subunit.
 
 0.828
SEL94053.1
Hypothetical protein.
 
     0.781
SEL94016.1
MoxR-like ATPase.
 
     0.738
coxM_1
Carbon monoxide dehydrogenase, medium subunit.
 
 
 0.729
SEM79926.1
Uncharacterized conserved protein, contains von Willebrand factor type A (vWA) domain.
 
     0.718
SEL94130.1
Molybdenum cofactor cytidylyltransferase.
 
     0.689
coxS_3
Carbon-monoxide dehydrogenase small subunit.
  
  0.673
SEM79892.1
MoxR-like ATPase.
 
     0.538
Your Current Organism:
Roseovarius tolerans
NCBI taxonomy Id: 74031
Other names: CIP 106398, DSM 11457, IFO 16695, JCM 21346, NBRC 16695, R. tolerans, strain EL-172
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.