STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
actP_2Cu+-exporting ATPase. (777 aa)    
Predicted Functional Partners:
actP_4
Cu+-exporting ATPase.
 
 
0.956
SEN68599.1
Methyltransferase domain-containing protein.
 
     0.811
ybaT
Amino acid transporter.
 
   
 0.746
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.733
SEN68788.1
Uncharacterized conserved protein, DUF302 family.
 
     0.696
ydjZ
Uncharacterized membrane protein YdjX, TVP38/TMEM64 family, SNARE-associated domain.
 
     0.657
SEN68559.1
Uncharacterized conserved protein.
     
 0.626
divJ
Signal transduction histidine kinase.
    
 0.593
SEN31213.1
GAF domain-containing protein.
    
 0.592
SEN30959.1
Putative ABC transport system permease protein.
  
  
 0.548
Your Current Organism:
Roseovarius tolerans
NCBI taxonomy Id: 74031
Other names: CIP 106398, DSM 11457, IFO 16695, JCM 21346, NBRC 16695, R. tolerans, strain EL-172
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