STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN78837.1Lyso-ornithine lipid acyltransferase. (277 aa)    
Predicted Functional Partners:
SEN78795.1
Ornithine-acyl[acyl carrier protein] N-acyltransferase.
 
  
 0.983
SEM78498.1
Ornithine-acyl[acyl carrier protein] N-acyltransferase.
 
  
 0.898
SEN78759.1
Protein of unknown function.
       0.680
SEM47906.1
Phospholipase D1/2.
 
  
 0.609
SEN78713.1
Histidine phosphotransferase ChpT.
       0.600
SEN31213.1
GAF domain-containing protein.
  
 
  0.580
plsY
Acyl-phosphate glycerol-3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.
  
 
 0.572
plsB
Glycerol-3-phosphate acyltransferase.
  
 
 0.569
psd
Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
 
  
 0.569
ppsE
Acyl transferase domain-containing protein.
  
 0.559
Your Current Organism:
Roseovarius tolerans
NCBI taxonomy Id: 74031
Other names: CIP 106398, DSM 11457, IFO 16695, JCM 21346, NBRC 16695, R. tolerans, strain EL-172
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.