Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EKE86981.1COG0334 Glutamate dehydrogenase/leucine dehydrogenase. (348 aa)    
Predicted Functional Partners:
gltB
COG0067 Glutamate synthase domain 1.
  
 0.989
EKE84222.1
Alpha keto acid dehydrogenase E1 subunit alpha; COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit.
  
 
  0.957
EKE84221.1
COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit.
  
 
 0.938
ilvE
Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.914
EKE83702.1
Bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
  
 
 0.758
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
   
 
 0.709
EKE79899.1
COG0436 Aspartate/tyrosine/aromatic aminotransferase.
    
 0.705
EKE84709.1
Acetolactate synthase; COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]; Belongs to the TPP enzyme family.
  
 0.648
EKE82913.1
COG0069 Glutamate synthase domain 2; Belongs to the glutamate synthase family.
  
 0.628
argH
Bifunctional argininosuccinate lyase/N-acetylglutamate synthase; COG0165 Argininosuccinate lyase; In the N-terminal section; belongs to the lyase 1 family. Argininosuccinate lyase subfamily.
    
 0.626
Your Current Organism:
Idiomarina xiamenensis
NCBI taxonomy Id: 740709
Other names: I. xiamenensis 10-D-4, Idiomarina sp. 10-D-4, Idiomarina xiamenensis 10-D-4, Idiomarina xiamenensis str. 10-D-4, Idiomarina xiamenensis strain 10-D-4
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