STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKE79409.1COG3209 Rhs family protein. (1110 aa)    
Predicted Functional Partners:
EKE79068.1
Hypothetical protein.
   
    0.601
EKE80853.1
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
  
 0.587
EKE79322.1
Putative type II thioesterase; COG3208 Predicted thioesterase involved in non-ribosomal peptide biosynthesis.
  
     0.569
EKE83461.1
COG3209 Rhs family protein.
 
 
 
0.551
EKE79408.1
Allantoate amidohydrolase; COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases.
       0.497
EKE80861.1
COG0236 Acyl carrier protein.
  
     0.492
smc
Chromosome segregation ATPase, sms; Required for chromosome condensation and partitioning. Belongs to the SMC family.
  
 
 0.473
EKE80855.1
COG3321 Polyketide synthase modules and related proteins.
  
     0.448
EKE80856.1
COG3321 Polyketide synthase modules and related proteins.
  
     0.448
srkA
Serine/threonine protein kinase; A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response.
 
     0.443
Your Current Organism:
Idiomarina xiamenensis
NCBI taxonomy Id: 740709
Other names: I. xiamenensis 10-D-4, Idiomarina sp. 10-D-4, Idiomarina xiamenensis 10-D-4, Idiomarina xiamenensis str. 10-D-4, Idiomarina xiamenensis strain 10-D-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.