Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
UYA_07490Cation:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (113 aa)    
Predicted Functional Partners:
UYA_07515
NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.999
UYA_07495
pH regulation protein F; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.994
UYA_07500
Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.992
UYA_07565
Monovalent cation/H+ antiporter subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.992
UYA_07505
NADH/ubiquinone/plastoquinone; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.990
UYA_07510
Na+/H+ antiporter subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.987
UYA_07580
Na+/H+ antiporter subunit E; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.956
UYA_07575
Monovalent cation/H+ antiporter subunit D; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.952
UYA_07570
Na+/H+ antiporter subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.934
UYA_07585
K+/H+ antiporter subunit F; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.916
Your Current Organism:
Pseudomonas alcaliphila
NCBI taxonomy Id: 741155
Other names: P. alcaliphila JAB1, Pseudomonas alcaliphila JAB1, Pseudomonas alcaliphila str. JAB1, Pseudomonas alcaliphila strain JAB1, Pseudomonas sp. JAB1
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