Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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[Homology]
Score
UYA_09660Hemolysin-type calcium-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (3511 aa)    
Predicted Functional Partners:
UYA_09650
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.866
UYA_09645
Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.793
UYA_09655
Channel protein TolC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.753
UYA_24400
Magnesium chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.713
UYA_09675
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.707
UYA_09665
Tryptophan synthase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.683
UYA_08125
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0276 family.
   
    0.667
UYA_12395
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0276 family.
   
    0.667
UYA_09455
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.643
UYA_02535
Glutamate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.581
Your Current Organism:
Pseudomonas alcaliphila
NCBI taxonomy Id: 741155
Other names: P. alcaliphila JAB1, Pseudomonas alcaliphila JAB1, Pseudomonas alcaliphila str. JAB1, Pseudomonas alcaliphila strain JAB1, Pseudomonas sp. JAB1
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